Related Repositories for thackl/gggenomes

Repository	⭐ Stars	🍴 Forks	Ratio
thackl/gggenomes	560	21	26.67
wilkox/gggenes	160	8	20.00
OpenGene/fastp	158	8	19.75
cmdcolin/awesome-genome-visualization	140	11	12.73
lh3/minimap2	137	12	11.42
shenwei356/seqkit	136	7	19.43
gamcil/clinker	131	7	18.71
danielecook/Awesome-Bioinformatics	122	15	8.13
soedinglab/MMseqs2	119	4	29.75
thomasp85/patchwork	117	5	23.40
cxli233/FriendsDontLetFriends	116	2	58.00
oschwengers/bakta	112	5	22.40
lh3/seqtk	112	10	11.20
google/deepvariant	109	12	9.08
bbuchfink/diamond	107	5	21.40
tanghaibao/jcvi	105	18	5.83
ryanlayer/samplot	104	7	14.86
kblin/ncbi-genome-download	101	11	9.18
tseemann/prokka	101	12	8.42
IndrajeetPatil/ggstatsplot	100	4	25.00
deepmind/alphafold	100	7	14.29
stephenturner/oneliners	100	23	4.35
deeptools/pyGenomeTracks	99	6	16.50
ablab/spades	99	4	24.75
NBISweden/AGAT	99	3	33.00
jokergoo/ComplexHeatmap	98	9	10.89
malonge/RagTag	97	7	13.86
rrwick/Unicycler	96	8	12.00
fenderglass/Flye	95	10	9.50
brentp/mosdepth	95	8	11.88
TheAlgorithms/Python	94	9	10.44
ewels/MultiQC	93	19	4.89
nextflow-io/nextflow	92	16	5.75
pachterlab/gget	92	4	23.00
seandavi/awesome-single-cell	92	10	9.20
snakemake/snakemake	92	11	8.36
agshumate/Liftoff	92	4	23.00
pangenome/pggb	91	2	45.50
schneebergerlab/syri	90	2	45.00
duerrsimon/bioicons	89	3	29.67
jokergoo/circlize	89	8	11.12
ComparativeGenomicsToolkit/cactus	88	5	17.60
lh3/bwa	88	10	8.80
crazyhottommy/getting-started-with-genomics-tools-and-resources	87	12	7.25
fritzsedlazeck/Sniffles	86	2	43.00
schneebergerlab/plotsr	84	5	16.80
DerrickWood/kraken2	83	6	13.83
vgteam/vg	83	11	7.55
jlevy/the-art-of-command-line	83	9	9.22
YuLab-SMU/ggtree	82	3	27.33
biopython/biopython	82	18	4.56
alexdobin/STAR	81	5	16.20
bwa-mem2/bwa-mem2	81	4	20.25
gpertea/gffread	80	3	26.67
pachterlab/ffq	80	3	26.67
tseemann/snippy	80	4	20.00
shenwei356/taxonkit	80	2	40.00
rrwick/Bandage	80	6	13.33
gtonkinhill/panaroo	79	2	39.50
pola-rs/polars	79	1	79.00
rust-bio/rust-bio	77	5	15.40
ParBLiSS/FastANI	77	4	19.25
bactopia/bactopia	76	8	9.50
krassowski/complex-upset	76	1	76.00
davidemms/OrthoFinder	76	9	8.44
wwood/CoverM	75	4	18.75
lh3/bioawk	75	4	18.75
chhylp123/hifiasm	75	3	25.00
shenwei356/csvtk	74	5	14.80
rstudio/gt	74	1	74.00
lh3/minigraph	74	4	18.50
willmcgugan/rich	74	1	74.00
vinta/awesome-python	73	9	8.11
lh3/miniprot	73	2	36.50
eggnogdb/eggnog-mapper	73	3	24.33
arpcard/rgi	73	2	36.50
MrOlm/drep	72	5	14.40
oushujun/EDTA	72	4	18.00
Ecogenomics/GTDBTk	72	4	18.00
labgem/PPanGGOLiN	72	5	14.40
ossu/bioinformatics	71	4	17.75
marbl/MashMap	71	5	14.20
arq5x/bedtools2	71	7	10.14
samtools/samtools	70	9	7.78
tanghaibao/goatools	70	6	11.67
mamba-org/mamba	69	1	69.00
slowkow/ggrepel	69	4	17.25
broadinstitute/gatk	69	9	7.67
quinlan-lab/applied-computational-genomics	69	10	6.90
ncbi/sra-tools	68	6	11.33
amkozlov/raxml-ng	68	4	17.00
ibraheemdev/modern-unix	68	3	22.67
pditommaso/awesome-pipeline	68	2	34.00
erikgahner/awesome-ggplot2	68	5	13.60
tensorflow/tensorflow	68	7	9.71
rrwick/Trycycler	68	6	11.33
whatshap/whatshap	68	4	17.00
thomasp85/ggforce	67	2	33.50
tseemann/abricate	66	8	8.25
jtamames/SqueezeMeta	66	4	16.50