GitRelate(d)
Related Repositories for Illumina/strelka
Repository
⭐ Stars
🍴 Forks
Ratio
Illumina/strelka
364
19
19.16
OpenGene/fastp
151
14
10.79
google/deepvariant
147
17
8.65
broadinstitute/gatk
145
21
6.90
lh3/minimap2
122
12
10.17
Illumina/manta
117
13
9.00
lh3/bwa
114
23
4.96
alexdobin/STAR
110
18
6.11
seandavi/awesome-single-cell
104
13
8.00
samtools/samtools
101
21
4.81
brentp/mosdepth
100
10
10.00
bwa-mem2/bwa-mem2
97
5
19.40
broadinstitute/picard
93
13
7.15
lh3/seqtk
91
11
8.27
ewels/MultiQC
90
19
4.74
nextflow-io/nextflow
89
19
4.68
shenwei356/seqkit
87
10
8.70
etal/cnvkit
86
16
5.38
Illumina/hap.py
81
6
13.50
arq5x/bedtools2
80
14
5.71
samtools/htslib
79
20
3.95
Ensembl/ensembl-vep
75
9
8.33
pachterlab/kallisto
75
9
8.33
satijalab/seurat
74
7
10.57
tensorflow/tensorflow
73
14
5.21
dellytools/delly
73
11
6.64
samtools/bcftools
73
11
6.64
vgteam/vg
73
8
9.12
jokergoo/ComplexHeatmap
72
7
10.29
mskcc/vcf2maf
72
12
6.00
biod/sambamba
72
5
14.40
ryanlayer/samplot
70
4
17.50
ekg/freebayes
70
14
5.00
arq5x/lumpy-sv
68
9
7.56
danielecook/Awesome-Bioinformatics
67
11
6.09
fritzsedlazeck/Sniffles
66
2
33.00
lindenb/jvarkit
66
4
16.50
luntergroup/octopus
66
8
8.25
TheAlgorithms/Python
65
6
10.83
broadinstitute/cromwell
65
4
16.25
vcftools/vcftools
65
6
10.83
biopython/biopython
64
17
3.76
COMBINE-lab/salmon
64
3
21.33
brentp/vcfanno
64
4
16.00
samtools/hts-specs
64
16
4.00
pysam-developers/pysam
63
10
6.30
vcflib/vcflib
63
5
12.60
RealTimeGenomics/rtg-tools
61
3
20.33
marcelm/cutadapt
61
7
8.71
griffithlab/rnaseq_tutorial
61
11
5.55
BenLangmead/bowtie2
61
7
8.71
fritzsedlazeck/SURVIVOR
61
4
15.25
pezmaster31/bamtools
60
8
7.50
ncbi/sra-tools
60
10
6.00
AstraZeneca-NGS/VarDict
60
6
10.00
deepmind/alphafold
59
6
9.83
snakemake/snakemake
59
7
8.43
hail-is/hail
58
3
19.33
google/nucleus
58
5
11.60
igvteam/igv.js
58
5
11.60
CGATOxford/UMI-tools
57
11
5.18
PapenfussLab/gridss
56
3
18.67
pditommaso/awesome-pipeline
56
6
9.33
walaj/svaba
56
2
28.00
bbuchfink/diamond
56
3
18.67
igvteam/igv
56
8
7.00
JuliaLang/julia
55
3
18.33
deeptools/deepTools
55
4
13.75
fulcrumgenomics/fgbio
55
3
18.33
junegunn/fzf
55
2
27.50
arq5x/gemini
55
12
4.58
sindresorhus/awesome
55
6
9.17
pytorch/pytorch
55
8
6.88
DerrickWood/kraken2
54
4
13.50
chapmanb/bcbio-nextgen
54
10
5.40
brentp/smoove
53
5
10.60
brentp/somalier
53
1
53.00
adamewing/bamsurgeon
53
4
13.25
bioconda/bioconda-recipes
52
38
1.37
PoisonAlien/maftools
52
16
3.25
deweylab/RSEM
51
2
25.50
rust-bio/rust-bio
50
6
8.33
vinta/awesome-python
50
3
16.67
brentp/cyvcf2
50
1
50.00
crazyhottommy/RNA-seq-analysis
50
11
4.55
sigven/pcgr
50
6
8.33
marbl/canu
50
5
10.00
jlevy/the-art-of-command-line
50
2
25.00
BurntSushi/ripgrep
50
2
25.00
quinlan-lab/applied-computational-genomics
49
6
8.17
sharkdp/bat
49
3
16.33
nf-core/sarek
49
5
9.80
josephmisiti/awesome-machine-learning
49
5
9.80
lh3/minigraph
49
3
16.33
genome/bam-readcount
49
6
8.17
whatshap/whatshap
49
1
49.00
nygenome/lancet
49
3
16.33
trinityrnaseq/trinityrnaseq
49
9
5.44
ruanjue/wtdbg2
48
3
16.00
dkoboldt/varscan
48
5
9.60
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